Song Liu, PhD

Song Liu, PhD

Research Associate Professor, Department of Biostatistics

Contact Information

CGP1 - 312
Roswell Park Cancer Institute
Phone: 716-845-1628
Fax: 716-845-4860
Email: song.liu@roswellpark.org

 

Research Interests:   Translational Bioinformatics; Biomarker Discovery; Companion Diagnostics; Cancer Genomics; Precision Medicine

 

Selected Publications

  • Yan L, Tian L, Liu S. Combining Large Number of Weak Biomarkers Based on AUC.  Statistics in Medicine, 2015, doi:  10.1002/sim.6600
  • Dong T, Attwood K, Hutson A, Liu S, Tian L.  A New Diagnosic accuracy measure and cut-point selection criterion.  Statistical methods in Medical Research, 2015, doi:10.1177/096228021561163
  • Ma l, Qin M, Liu B, Hu Q, Wei L, Wang J, and Liu S.  cnvCurator:  an interactive visualization and editing tool for somatic copy number variations.  BMC Bioinformatics, 16:331, 2015
  • Wei L, Liu S, Controy J, Wang J, Papanicolau-Sengos A, Glenn ST, Murakami M, Liu L, Hu Q, Conroy J, Miles, KM, Nowak DE, Liu B, Qin M, Bshara W, Omilian AR, Head K, Bianchi M, Burgher, B, Darlak C, Kane J, Merzianu M, Cheney R, Fabiano A, Salerno K, Khushalani N, Trump D, Johnson C, Morrison CD.  Whole-genome sequencing of a malignant granular cell tumor with metabolic response to pazopanib.  Cold Spring Harbor Molecular Case Study, 1:  a000380, 2015
  • Wei L, Liu L, Controy JR, Hu Q, Conroy JM, Morrison CD, Johnson CS, Wang J, and Liu S.  MAC:  identifying and correcting annotation for multi-nucleotide variations.  BMC Genomics, 16:569, 2015
  • Qin M, Liu B, Conroy JM, Morrison CD, Hu Q, Cheng Y, Murakami M, Odunsi AO, Johnson CS, Wei L, Liu S* and Wang J*.  SCNVSim:  somatic copy number variation and structure variation simulator.  BMC Bioinformatics, 16(1), 66, 2015
  • Zhu Q, Hu Q, Shepher L, Wang J, Wei L, Morrison CD, Conroy JM, Glenn ST, Warren D, Kwan ML, ERgas IJ, Roh JM, Kushi LH, Ambrosone CB, Liu S, Yao S.  The Impact of DNA Input Amount andDNA Source on the Performance of Whole-Exome Sequencing in Cancer Epidemiology. Cancer Epidemiology, Biomarkers  Prevention, 24(8):1207-13, 2015
  • Liu Q, Cirulli ET, Han Y, Yao S, Liu S and Zhu Q.  Systematic assessment of imputation performance using the 1000 Genomes reference panels.  Briefings in Bioinformatics, 16(4):549-62, 2015
  • Liu B, Conroy JM, Morrison CD, Odunsi AO, Qin M. Wei L, Trump DL, Johnson CS, Liu S* and Wang J*.  Structural variation discovery in the cancer genome using next generation sequencing:  computational solutions and perspectives.  Oncotarget, 6(8), 5477-5489, 2015

Full publication list:  https://scholar.google.com/citations?user=nwPxijEAAAAJ&hl=en