Software

1. R(>=2.4.1) For installation of R, refer to http://www.r-project.org
2. ImageMagicK For installation, refer to http://www.imagemagick.org/script/index.php
3. libtiff For installation, refer to http://www.libtiff.org/

depends on:
1. sendplot (>=3.8.0)
2. rtiff

suggests (only if you intend to run additional examples in vignette):

1. aCGH

2. SNPchip

There are a number of ways to download and install the package. Here are a few of many:

Option 1:
1. Download the sendplot package from this website
2. Unzip the downloaded file and save it under R/library, or the path to the directory containing stored library (can be obtained in R with the command .libPaths())
3. load the library into R using the command library("iGenomicViewer")

Option 2 (command line):
1. Download the sendplot package from this website
2. In command line use the command: R CMD INSTALL iGenomicViewer_1.9.0 tar.gz (or whatever the package version you are using)
3. Open R and load the library using the command library("iGenomicViewer")

Option 3 (GUI version):
1. Download zip file
2. Open R, select the menu option package, choose install packages from local zip, navigate to saved file, click on open
3. load the library into R using the command library("iGenomicViewer")

Note: We are constantly making updates please check back periodically for most recent version.

Note: iGenomicViewer depends on the R package sendplot. Sendplot uses the system requirements libtiff and imageMagick, and depends on rtiff.